PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV42050.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family B3
Protein Properties Length: 265aa    MW: 30572.5 Da    PI: 5.2358
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV42050.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.52.1e-1790190198
                 EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 
                 f+k+l++sdv+ ++r+vlpk+ ae++   ++++e++ +++ d +g  +W +k++y  +++s++yvl+  + +Fv+a+gL  gD ++ +  ++ +++++v
  KZV42050.1  90 FKKQLKNSDVSGLRRMVLPKRDAEAYlpVLDSKEGIPISMLDMDGiHEWWFKFRYwpNNSSRMYVLE-STGDFVNAHGLLPGDYILVY--QNiEDRRYV 185
                 89**************************555557788********9*******99888999999999.9****************999..788999999 PP

                 EEEE- CS
          B3  94 vkvfr 98 
                 + +++
  KZV42050.1 186 IEARK 190
                 88876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019366.87E-1988178IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.1E-2389193IPR015300DNA-binding pseudobarrel domain
CDDcd100174.17E-2389190No hitNo description
PROSITE profilePS508639.17890192IPR003340B3 DNA binding domain
PfamPF023626.4E-1490190IPR003340B3 DNA binding domain
SMARTSM010191.5E-1690192IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0008284Biological Processpositive regulation of cell proliferation
GO:0009733Biological Processresponse to auxin
GO:0010116Biological Processpositive regulation of abscisic acid biosynthetic process
GO:0010262Biological Processsomatic embryogenesis
GO:0010373Biological Processnegative regulation of gibberellin biosynthetic process
GO:0048573Biological Processphotoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MARNEVEAHS TVTYCARELV NSGGRRRRSK QWESSDRADL FSTPGFTIQR GPRMPRSRRA  60
SLQSLTFPLS HVPPLHRPRE LDLTKICYLF KKQLKNSDVS GLRRMVLPKR DAEAYLPVLD  120
SKEGIPISML DMDGIHEWWF KFRYWPNNSS RMYVLESTGD FVNAHGLLPG DYILVYQNIE  180
DRRYVIEARK SEEYEEQGIY NDLELRLPAD PGTALDGSEM LFEYDTTFLD DSPLDYVGES  240
INNLACLGSH LAFEAIDKYT ADDFL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12330GRRRRSKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00382DAPTransfer from AT3G26790Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098957.11e-109PREDICTED: B3 domain-containing transcription factor FUS3-like isoform X1
SwissprotQ9LW315e-57FUS3_ARATH; B3 domain-containing transcription factor FUS3
TrEMBLA0A022QSZ86e-90A0A022QSZ8_ERYGU; Uncharacterized protein (Fragment)
STRINGGLYMA19G27336.12e-61(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA80452125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.13e-58B3 family protein